STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A182FBA9Small nuclear ribonucleoprotein Sm D3. (146 aa)    
Predicted Functional Partners:
A0A182FAH3
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.999
A0A182FNY2
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
A0A182FPH7
Small nuclear ribonucleoprotein G.
   
 0.999
A0A1I8JSQ0
Small nuclear ribonucleoprotein-associated protein.
   
 0.999
A0A182F4V4
Sm domain-containing protein.
   
 0.998
A0A182FDS2
Uncharacterized protein.
   
 0.998
A0A182F8D3
Tr-type G domain-containing protein.
   
 0.997
A0A182FGR9
MPN domain-containing protein.
   
 0.997
A0A182FBE2
U1 small nuclear ribonucleoprotein A.
   
 0.996
A0A182F7K7
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
   
 0.995
Your Current Organism:
Anopheles albimanus
NCBI taxonomy Id: 7167
Other names: A. albimanus
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