A0A182FBT1 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FBT1

Endo/exonuclease/phosphatase domain-containing protein. (472 aa)

Predicted Functional Partners:

A0A182F0N1

0.489

PAN2

0.467

A0A182FHI8

0.465

A0A182FGM3

0.432

A0A1Y9G9K0

0.401

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A182F0N1	A0A182FBT1	A0A182F0N1	A0A182FBT1	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.489
A0A182FBT1	A0A182F0N1	A0A182FBT1	A0A182F0N1	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.489
A0A182FBT1	A0A182FGM3	A0A182FBT1	A0A182FGM3	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.432
A0A182FBT1	A0A182FHI8	A0A182FBT1	A0A182FHI8	Endo/exonuclease/phosphatase domain-containing protein.	RNA_bind domain-containing protein.	0.465
A0A182FBT1	A0A1Y9G9K0	A0A182FBT1	A0A1Y9G9K0	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.401
A0A182FBT1	PAN2	A0A182FBT1	A0A182FTJ4	Endo/exonuclease/phosphatase domain-containing protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	0.467
A0A182FGM3	A0A182FBT1	A0A182FGM3	A0A182FBT1	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Endo/exonuclease/phosphatase domain-containing protein.	0.432
A0A182FGM3	A0A182FHI8	A0A182FGM3	A0A182FHI8	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	RNA_bind domain-containing protein.	0.653
A0A182FGM3	PAN2	A0A182FGM3	A0A182FTJ4	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	0.623
A0A182FHI8	A0A182FBT1	A0A182FHI8	A0A182FBT1	RNA_bind domain-containing protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.465
A0A182FHI8	A0A182FGM3	A0A182FHI8	A0A182FGM3	RNA_bind domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.653
A0A182FHI8	PAN2	A0A182FHI8	A0A182FTJ4	RNA_bind domain-containing protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	0.467
A0A1Y9G9K0	A0A182FBT1	A0A1Y9G9K0	A0A182FBT1	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.401
PAN2	A0A182FBT1	A0A182FTJ4	A0A182FBT1	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	Endo/exonuclease/phosphatase domain-containing protein.	0.467
PAN2	A0A182FGM3	A0A182FTJ4	A0A182FGM3	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.623
PAN2	A0A182FHI8	A0A182FTJ4	A0A182FHI8	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	RNA_bind domain-containing protein.	0.467