A0A182FC88 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FC88

RING-type domain-containing protein. (720 aa)

Predicted Functional Partners:

A0A182F495

0.961

A0A182FP30

0.951

A0A182FC29

0.783

A0A182F8T6

0.744

A0A182FLA1

0.723

A0A182FAU7

0.684

A0A182FR32

0.628

A0A182FDV8

0.624

A0A182F5K5

0.558

A0A182FFL8

0.489

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F495	A0A182F5K5	Uncharacterized protein.	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	0.943
A0A182F495	A0A182F8T6	Uncharacterized protein.	SAS-6_N domain-containing protein.	0.992
A0A182F495	A0A182FAU7	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.999
A0A182F495	A0A182FC29	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A182F495	A0A182FC88	Uncharacterized protein.	RING-type domain-containing protein.	0.961
A0A182F495	A0A182FLA1	Uncharacterized protein.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.731
A0A182F495	A0A182FP30	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.999
A0A182F5K5	A0A182F495	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	Uncharacterized protein.	0.943
A0A182F5K5	A0A182F8T6	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	SAS-6_N domain-containing protein.	0.814
A0A182F5K5	A0A182FAU7	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.785
A0A182F5K5	A0A182FC29	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	Uncharacterized protein.	0.620
A0A182F5K5	A0A182FC88	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	RING-type domain-containing protein.	0.558
A0A182F5K5	A0A182FLA1	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.817
A0A182F5K5	A0A182FP30	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.937
A0A182F8T6	A0A182F495	SAS-6_N domain-containing protein.	Uncharacterized protein.	0.992
A0A182F8T6	A0A182F5K5	SAS-6_N domain-containing protein.	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	0.814
A0A182F8T6	A0A182FAU7	SAS-6_N domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.999
A0A182F8T6	A0A182FC29	SAS-6_N domain-containing protein.	Uncharacterized protein.	0.985
A0A182F8T6	A0A182FC88	SAS-6_N domain-containing protein.	RING-type domain-containing protein.	0.744
A0A182F8T6	A0A182FLA1	SAS-6_N domain-containing protein.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.604