A0A182FCH6 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FCH6

Uncharacterized protein. (823 aa)

Predicted Functional Partners:

A0A182F4I5

0.999

A0A182FH54

0.999

A0A182FJV8

0.999

A0A182FNT4

0.999

A0A1Y9G8A6

0.998

A0A182FM54

0.996

A0A182F8C7

0.995

A0A182FB87

0.978

A0A182FU68

0.969

A0A182F344

0.967

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F344	A0A182F4I5	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.980
A0A182F344	A0A182FB87	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	VPS9 domain-containing protein.	0.785
A0A182F344	A0A182FCH6	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.967
A0A182F344	A0A182FH54	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.937
A0A182F344	A0A182FNT4	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.697
A0A182F4I5	A0A182F344	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.980
A0A182F4I5	A0A182FB87	Uncharacterized protein.	VPS9 domain-containing protein.	0.908
A0A182F4I5	A0A182FCH6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A182F4I5	A0A182FJV8	Uncharacterized protein.	FYVE-type domain-containing protein.	0.978
A0A182F4I5	A0A182FNT4	Uncharacterized protein.	Uncharacterized protein.	0.922
A0A182F4I5	A0A182FU68	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A182F8C7	A0A182FB87	Ubiquitin-like domain-containing protein.	VPS9 domain-containing protein.	0.580
A0A182F8C7	A0A182FCH6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.995
A0A182F8C7	A0A182FM54	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.969
A0A182F8C7	A0A182FNT4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.715
A0A182F8C7	A0A1Y9G8A6	Ubiquitin-like domain-containing protein.	60S ribosomal protein L40.	0.977
A0A182FB87	A0A182F344	VPS9 domain-containing protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.785
A0A182FB87	A0A182F4I5	VPS9 domain-containing protein.	Uncharacterized protein.	0.908
A0A182FB87	A0A182F8C7	VPS9 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.580
A0A182FB87	A0A182FCH6	VPS9 domain-containing protein.	Uncharacterized protein.	0.978