A0A182FD28 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FD28

PAP-associated domain-containing protein. (675 aa)

Predicted Functional Partners:

A0A182F3K6

0.718

A0A182F6Y8

0.638

A0A182FPG4

0.635

A0A182FS87

0.607

A0A182FV96

0.601

A0A182FLX0

0.597

A0A182FGM3

0.579

A0A182F643

0.560

A0A182FHJ2

0.544

A0A182FXF0

0.485

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F3K6	A0A182F643	SAM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.420
A0A182F3K6	A0A182FD28	SAM domain-containing protein.	PAP-associated domain-containing protein.	0.718
A0A182F643	A0A182F3K6	Uncharacterized protein; Belongs to the DEAD box helicase family.	SAM domain-containing protein.	0.420
A0A182F643	A0A182FD28	Uncharacterized protein; Belongs to the DEAD box helicase family.	PAP-associated domain-containing protein.	0.560
A0A182F643	A0A182FGM3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.988
A0A182F643	A0A182FLX0	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.466
A0A182F643	A0A182FV96	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nop domain-containing protein.	0.466
A0A182F6Y8	A0A182FD28	WD_REPEATS_REGION domain-containing protein.	PAP-associated domain-containing protein.	0.638
A0A182F6Y8	A0A182FLX0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
A0A182F6Y8	A0A182FPG4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.846
A0A182F6Y8	A0A182FV96	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.997
A0A182FD28	A0A182F3K6	PAP-associated domain-containing protein.	SAM domain-containing protein.	0.718
A0A182FD28	A0A182F643	PAP-associated domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.560
A0A182FD28	A0A182F6Y8	PAP-associated domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.638
A0A182FD28	A0A182FGM3	PAP-associated domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.579
A0A182FD28	A0A182FHJ2	PAP-associated domain-containing protein.	DIS3-like exonuclease 2; Belongs to the RNR ribonuclease family.	0.544
A0A182FD28	A0A182FLX0	PAP-associated domain-containing protein.	Uncharacterized protein.	0.597
A0A182FD28	A0A182FPG4	PAP-associated domain-containing protein.	Uncharacterized protein.	0.635
A0A182FD28	A0A182FS87	PAP-associated domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.607
A0A182FD28	A0A182FV96	PAP-associated domain-containing protein.	Nop domain-containing protein.	0.601