A0A182FDW4 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FDW4

Uncharacterized protein. (734 aa)

Predicted Functional Partners:

A0A182FGR9

0.903

A0A1Y9G9K8

0.875

A0A182FHQ4

0.774

A0A182F8D3

0.721

A0A182FS15

0.639

A0A182FRP0

0.636

A0A182F320

0.633

A0A182F558

0.616

A0A182F1W0

0.528

A0A182FH42

0.489

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F1W0	A0A182F8D3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.530
A0A182F1W0	A0A182FDW4	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A182F1W0	A0A182FH42	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.839
A0A182F1W0	A0A182FRP0	Uncharacterized protein.	HIT-type domain-containing protein.	0.499
A0A182F320	A0A182F558	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.895
A0A182F320	A0A182F8D3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.836
A0A182F320	A0A182FDW4	Uncharacterized protein.	Uncharacterized protein.	0.633
A0A182F320	A0A182FGR9	Uncharacterized protein.	MPN domain-containing protein.	0.968
A0A182F320	A0A182FHQ4	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A182F558	A0A182F320	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.895
A0A182F558	A0A182F8D3	WD_REPEATS_REGION domain-containing protein.	Tr-type G domain-containing protein.	0.999
A0A182F558	A0A182FDW4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.616
A0A182F558	A0A182FGR9	WD_REPEATS_REGION domain-containing protein.	MPN domain-containing protein.	0.998
A0A182F558	A0A182FHQ4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.824
A0A182F558	A0A182FRP0	WD_REPEATS_REGION domain-containing protein.	HIT-type domain-containing protein.	0.525
A0A182F558	A0A182FS15	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.897
A0A182F558	A0A1Y9G9K8	WD_REPEATS_REGION domain-containing protein.	Pre-mRNA-splicing helicase BRR2.	0.998
A0A182F8D3	A0A182F1W0	Tr-type G domain-containing protein.	Uncharacterized protein.	0.530
A0A182F8D3	A0A182F320	Tr-type G domain-containing protein.	Uncharacterized protein.	0.836
A0A182F8D3	A0A182F558	Tr-type G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999