A0A182FEI4 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FEI4

AA_TRNA_LIGASE_II domain-containing protein. (539 aa)

Predicted Functional Partners:

A0A182FL30

0.999

A0A182G0D4

0.979

A0A182FRD7

0.976

A0A182F491

0.972

A0A182G0E8

0.967

A0A182FHP3

0.963

A0A182FV08

0.958

A0A182F4C6

0.956

A0A182FLS0

0.955

A0A182F110

0.941

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182F110	A0A182F491	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.820
A0A182F110	A0A182F4C6	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.732
A0A182F110	A0A182FEI4	AA_TRNA_LIGASE_II domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.941
A0A182F110	A0A182FL30	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.989
A0A182F110	A0A182FLS0	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.718
A0A182F110	A0A182FRD7	AA_TRNA_LIGASE_II domain-containing protein.	Tyrosine--tRNA ligase.	0.912
A0A182F110	A0A182FV08	AA_TRNA_LIGASE_II domain-containing protein.	tRNA-binding domain-containing protein.	0.483
A0A182F110	A0A182G0D4	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.439
A0A182F110	A0A182G0E8	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.774
A0A182F491	A0A182F110	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.820
A0A182F491	A0A182F4C6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.986
A0A182F491	A0A182FEI4	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.972
A0A182F491	A0A182FHP3	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Thioredoxin_16 domain-containing protein.	0.985
A0A182F491	A0A182FL30	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.999
A0A182F491	A0A182FLS0	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.996
A0A182F491	A0A182FRD7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Tyrosine--tRNA ligase.	0.989
A0A182F491	A0A182FV08	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-binding domain-containing protein.	0.989
A0A182F491	A0A182G0D4	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.990
A0A182F491	A0A182G0E8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.988
A0A182F4C6	A0A182F110	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.732