A0A182FG34 protein (Anopheles albimanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182FG34

Uncharacterized protein. (604 aa)

Predicted Functional Partners:

A0A1I8JSV1

0.997

A0A182FHS7

0.995

A0A182FPY8

0.995

A0A182FLB7

0.950

A0A182FHN6

0.929

A0A182FCL8

0.921

A0A182FPR1

0.919

A0A182FLE9

0.917

A0A182FHY3

0.916

A0A182FN39

0.914

Your Current Organism:

Anopheles albimanus

NCBI taxonomy Id: 7167
Other names: A. albimanus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182FCL8	A0A182FG34	Uncharacterized protein.	Uncharacterized protein.	0.921
A0A182FCL8	A0A182FHN6	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.995
A0A182FCL8	A0A182FHS7	Uncharacterized protein.	Uncharacterized protein.	0.918
A0A182FCL8	A0A182FLB7	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A182FCL8	A0A182FLE9	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
A0A182FCL8	A0A182FN39	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A182FCL8	A0A182FPR1	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A182FCL8	A0A182FPY8	Uncharacterized protein.	HDAg domain-containing protein.	0.913
A0A182FG34	A0A182FCL8	Uncharacterized protein.	Uncharacterized protein.	0.921
A0A182FG34	A0A182FHN6	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.929
A0A182FG34	A0A182FHS7	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A182FG34	A0A182FHY3	Uncharacterized protein.	Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	0.916
A0A182FG34	A0A182FLB7	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A182FG34	A0A182FLE9	Uncharacterized protein.	RPOLD domain-containing protein.	0.917
A0A182FG34	A0A182FN39	Uncharacterized protein.	Uncharacterized protein.	0.914
A0A182FG34	A0A182FPR1	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.919
A0A182FG34	A0A182FPY8	Uncharacterized protein.	HDAg domain-containing protein.	0.995
A0A182FG34	A0A1I8JSV1	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A182FHN6	A0A182FCL8	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Uncharacterized protein.	0.995
A0A182FHN6	A0A182FG34	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	Uncharacterized protein.	0.929