Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182F4V3 | A0A182F4Y4 | Non-specific serine/threonine protein kinase. | ERCC4 domain-containing protein. | 0.608 |
A0A182F4V3 | A0A182F8F8 | Non-specific serine/threonine protein kinase. | RECA_2 domain-containing protein. | 0.828 |
A0A182F4V3 | A0A182FAU7 | Non-specific serine/threonine protein kinase. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.924 |
A0A182F4V3 | A0A182FD65 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.881 |
A0A182F4V3 | A0A182FET6 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.753 |
A0A182F4V3 | A0A182FL32 | Non-specific serine/threonine protein kinase. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.975 |
A0A182F4V3 | A0A182FNP0 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.908 |
A0A182F4V3 | A0A182FP30 | Non-specific serine/threonine protein kinase. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.784 |
A0A182F4V3 | A0A182FSD7 | Non-specific serine/threonine protein kinase. | RECA_2 domain-containing protein. | 0.821 |
A0A182F4V3 | A0A182FSS4 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.946 |
A0A182F4Y4 | A0A182F4V3 | ERCC4 domain-containing protein. | Non-specific serine/threonine protein kinase. | 0.608 |
A0A182F4Y4 | A0A182F8F8 | ERCC4 domain-containing protein. | RECA_2 domain-containing protein. | 0.897 |
A0A182F4Y4 | A0A182FAU7 | ERCC4 domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.993 |
A0A182F4Y4 | A0A182FD65 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.965 |
A0A182F4Y4 | A0A182FET6 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.786 |
A0A182F4Y4 | A0A182FL32 | ERCC4 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.982 |
A0A182F4Y4 | A0A182FNP0 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.970 |
A0A182F4Y4 | A0A182FP30 | ERCC4 domain-containing protein. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.927 |
A0A182F4Y4 | A0A182FSD7 | ERCC4 domain-containing protein. | RECA_2 domain-containing protein. | 0.880 |
A0A182F4Y4 | A0A182FSS4 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.939 |
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