Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182F1D9 | A0A182FL32 | Uncharacterized protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.766 |
A0A182F1D9 | A0A182FLX6 | Uncharacterized protein. | Uncharacterized protein. | 0.823 |
A0A182F1D9 | A0A182FQ04 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.808 |
A0A182F1D9 | A0A182FSS4 | Uncharacterized protein. | Uncharacterized protein. | 0.875 |
A0A182F4Y4 | A0A182F6R2 | ERCC4 domain-containing protein. | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | 0.895 |
A0A182F4Y4 | A0A182FI68 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.940 |
A0A182F4Y4 | A0A182FL32 | ERCC4 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.982 |
A0A182F4Y4 | A0A182FLX6 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.881 |
A0A182F4Y4 | A0A182FNN8 | ERCC4 domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.936 |
A0A182F4Y4 | A0A182FQ04 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.993 |
A0A182F4Y4 | A0A182FQS0 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.965 |
A0A182F4Y4 | A0A182FSS4 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.939 |
A0A182F6R2 | A0A182F4Y4 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | ERCC4 domain-containing protein. | 0.895 |
A0A182F6R2 | A0A182FI68 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | Uncharacterized protein. | 0.973 |
A0A182F6R2 | A0A182FL32 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.800 |
A0A182F6R2 | A0A182FLX6 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | Uncharacterized protein. | 0.805 |
A0A182F6R2 | A0A182FNN8 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | AA_TRNA_LIGASE_II domain-containing protein. | 0.944 |
A0A182F6R2 | A0A182FQ04 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | ERCC4 domain-containing protein. | 0.838 |
A0A182F6R2 | A0A182FQS0 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | ERCC4 domain-containing protein. | 0.893 |
A0A182F6R2 | A0A182FSS4 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | Uncharacterized protein. | 0.821 |
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