Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182MYQ0 | A0A182MZ19 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.740 |
A0A182MYQ0 | A0A182N1S6 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.644 |
A0A182MYQ0 | A0A182N2H0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.610 |
A0A182MYQ0 | A0A182N850 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
A0A182MYQ0 | A0A182NE83 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
A0A182MYQ0 | A0A182NIF6 | Uncharacterized protein. | BZIP domain-containing protein. | 0.628 |
A0A182MYQ0 | A0A182NIY3 | Uncharacterized protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.607 |
A0A182MYQ0 | A0A182NK98 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.621 |
A0A182MYQ0 | A0A182NQY4 | Uncharacterized protein. | Uncharacterized protein. | 0.684 |
A0A182MYQ0 | A0A182NQZ5 | Uncharacterized protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.607 |
A0A182MZ19 | A0A182MYQ0 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.740 |
A0A182MZ19 | A0A182NE83 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.830 |
A0A182MZ19 | A0A182NIY3 | Homeobox domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.437 |
A0A182MZ19 | A0A182NQZ5 | Homeobox domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.437 |
A0A182N1S6 | A0A182MYQ0 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.644 |
A0A182N1S6 | A0A182N2H0 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | WD_REPEATS_REGION domain-containing protein. | 0.758 |
A0A182N1S6 | A0A182N850 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.973 |
A0A182N1S6 | A0A182NIF6 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | BZIP domain-containing protein. | 0.557 |
A0A182N1S6 | A0A182NIY3 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.881 |
A0A182N1S6 | A0A182NK98 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | HTH TFE/IIEalpha-type domain-containing protein. | 0.867 |
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