STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJ05684_b58100Unannotated protein. (61 aa)    
Predicted Functional Partners:
SJ05684_c08330
Unannotated protein.
   
 
 0.638
SJ05684_b59470
Unannotated protein.
   
 
 0.638
SJ05684_b47060
Unannotated protein.
   
 
 0.638
SJ05684_b49160
Unannotated protein.
   
 
 0.638
SJ05684_b47580
Unannotated protein.
   
   0.553
SJ05684_b58910
Unannotated protein.
   
   0.553
SJ05684_b43880
Unannotated protein.
   
   0.534
SJ05684_b58110
Unannotated protein.
       0.521
SJ05684_c09410
Unannotated protein.
    
   0.412
SJ05684_b59110
Unannotated protein.
    
   0.412
Your Current Organism:
Ensifer sojae
NCBI taxonomy Id: 716928
Other names: E. sojae CCBAU 05684, Ensifer sojae CCBAU 05684, Ensifer sojae str. CCBAU 05684, Ensifer sojae strain CCBAU 05684, Sinorhizobium sp. CCBAU 05684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.