STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7R8Z1RNA-dependent RNA polymerase. (172 aa)    
Predicted Functional Partners:
A0A4Y7TWR4
RPOLD domain-containing protein.
    
   0.507
A0A4Y7TYY3
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
   0.507
A0A4Y7SNB9
RBP11-like subunits of RNA polymerase.
    
 
 0.469
A0A4Y7RBC2
Uncharacterized protein.
    
 
 0.428
A0A4Y7T0S1
Helicase ATP-binding domain-containing protein.
    
 
 0.428
A0A4Y7T1B9
Uncharacterized protein.
    
 
 0.428
A0A4Y7T7H6
Ribonuclease III.
    
 
 0.428
A0A4Y7TQ64
Type III restriction enzyme; Belongs to the helicase family. Dicer subfamily.
    
 
 0.428
A0A4Y7TG48
Uncharacterized protein.
    
   0.404
A0A4Y7TNI6
Uncharacterized protein.
    
   0.404
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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