STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7RRN2Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
A0A4Y7TRX3
Uncharacterized protein.
   
 0.979
A0A4Y7TRE2
Uncharacterized protein.
   
 0.971
A0A4Y7T806
RNA splicing factor PRP9.
    
 0.967
A0A4Y7TWU1
Splicing factor 3B, subunit 5.
   
 0.967
A0A4Y7TZ67
Spliceosome associated protein.
   
 0.964
A0A4Y7T2N5
Pre-mRNA-splicing factor RSE1.
   
 0.963
A0A4Y7T912
RNA-binding domain-containing protein.
   
 0.959
A0A4Y7TRH6
PHF5-like protein.
    
 0.959
A0A4Y7TLP4
L domain-like protein.
    
 0.957
A0A4Y7TPJ9
Small nuclear ribonucleoprotein G.
   
 0.957
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.