STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7SGP1Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
A0A4Y7SQE8
Uncharacterized protein.
   
 0.898
A0A4Y7SXW3
Kinase-like protein.
    
 0.675
A0A4Y7TB23
EGF-like domain-containing protein.
   
 0.622
A0A4Y7SYW0
Uncharacterized protein.
    
  0.567
A0A4Y7SVN3
Uncharacterized protein.
  
 
  0.556
A0A4Y7SPZ8
Kinase-like protein.
   
  0.510
A0A4Y7TI98
ANK_REP_REGION domain-containing protein.
   
  0.510
A0A4Y7SRD7
Ankyrin.
   
  0.509
A0A4Y7T1E5
Ankyrin.
   
  0.509
A0A4Y7SXE6
SKIP_SNW domain-containing protein.
    
  0.483
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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