A0A4Y7SJP2 protein (Coprinellus micaceus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Y7SJP2

Peptide hydrolase; Belongs to the peptidase M28 family. (902 aa)

Predicted Functional Partners:

A0A4Y7THS2

0.654

A0A4Y7TNW3

0.654

A0A4Y7U0D9

0.631

A0A4Y7TP91

0.628

A0A4Y7SSW4

0.623

A0A4Y7ST67

0.623

A0A4Y7U1Z9

0.619

A0A4Y7TFS1

0.615

A0A4Y7TVE1

0.614

A0A4Y7TPD0

0.611

Your Current Organism:

Coprinellus micaceus

NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y7SJP2	A0A4Y7SSW4	Peptide hydrolase; Belongs to the peptidase M28 family.	SEP-domain-containing protein.	0.623
A0A4Y7SJP2	A0A4Y7ST67	Peptide hydrolase; Belongs to the peptidase M28 family.	Vacuolar H+ ATPase E1.	0.623
A0A4Y7SJP2	A0A4Y7TFS1	Peptide hydrolase; Belongs to the peptidase M28 family.	Uncharacterized protein.	0.615
A0A4Y7SJP2	A0A4Y7THS2	Peptide hydrolase; Belongs to the peptidase M28 family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.654
A0A4Y7SJP2	A0A4Y7TNW3	Peptide hydrolase; Belongs to the peptidase M28 family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.654
A0A4Y7SJP2	A0A4Y7TP91	Peptide hydrolase; Belongs to the peptidase M28 family.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.628
A0A4Y7SJP2	A0A4Y7TPD0	Peptide hydrolase; Belongs to the peptidase M28 family.	V-type ATPase.	0.611
A0A4Y7SJP2	A0A4Y7TVE1	Peptide hydrolase; Belongs to the peptidase M28 family.	Homocysteine S-methyltransferase.	0.614
A0A4Y7SJP2	A0A4Y7U0D9	Peptide hydrolase; Belongs to the peptidase M28 family.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.631
A0A4Y7SJP2	A0A4Y7U1Z9	Peptide hydrolase; Belongs to the peptidase M28 family.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.619
A0A4Y7SSW4	A0A4Y7SJP2	SEP-domain-containing protein.	Peptide hydrolase; Belongs to the peptidase M28 family.	0.623
A0A4Y7ST67	A0A4Y7SJP2	Vacuolar H+ ATPase E1.	Peptide hydrolase; Belongs to the peptidase M28 family.	0.623
A0A4Y7ST67	A0A4Y7TP91	Vacuolar H+ ATPase E1.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.999
A0A4Y7ST67	A0A4Y7TPD0	Vacuolar H+ ATPase E1.	V-type ATPase.	0.999
A0A4Y7ST67	A0A4Y7U0D9	Vacuolar H+ ATPase E1.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.999
A0A4Y7ST67	A0A4Y7U1Z9	Vacuolar H+ ATPase E1.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.999
A0A4Y7TFS1	A0A4Y7SJP2	Uncharacterized protein.	Peptide hydrolase; Belongs to the peptidase M28 family.	0.615
A0A4Y7TFS1	A0A4Y7THS2	Uncharacterized protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.709
A0A4Y7TFS1	A0A4Y7TNW3	Uncharacterized protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.709
A0A4Y7THS2	A0A4Y7SJP2	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Peptide hydrolase; Belongs to the peptidase M28 family.	0.654