STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7SMX9RRM domain-containing protein. (636 aa)    
Predicted Functional Partners:
A0A4Y7T9N1
RNA-binding domain-containing protein.
   
 
 0.965
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.961
A0A4Y7TP33
CBF domain-containing protein.
   
 
 0.959
A0A4Y7T667
Brix-domain-containing protein.
   
 
 0.957
A0A4Y7TN90
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.950
A0A4Y7TRC2
ATP-dependent RNA helicase dbp9.
   
 0.944
A0A4Y7TJ79
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.938
A0A4Y7TZ74
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.938
A0A4Y7SYS9
WD40 repeat-like protein.
   
 
 0.928
A0A4Y7SXH7
Ribosome biogenesis protein BRX1.
   
 
 0.927
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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