STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7STM8Zf-C3HC-domain-containing protein. (569 aa)    
Predicted Functional Partners:
A0A4Y7TA14
Uncharacterized protein.
    
  0.842
A0A4Y7TA75
Uncharacterized protein.
    
  0.842
A0A4Y7U053
E3 ubiquitin ligase SCF complex Skp subunit; Belongs to the SKP1 family.
    
  0.842
A0A4Y7SY69
RING/U-box.
    
 0.711
A0A4Y7SPE1
Ubiquitin-protein ligase; Belongs to the cullin family.
    
  0.671
A0A4Y7TIQ8
Cullin-domain-containing protein; Belongs to the cullin family.
    
  0.671
A0A4Y7U0F8
Cullin-domain-containing protein; Belongs to the cullin family.
    
  0.671
A0A4Y7TY77
Uncharacterized protein.
    
  0.665
A0A4Y7ST02
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.554
A0A4Y7SS01
A/B/D/E cyclin; Belongs to the cyclin family.
    
 
 0.407
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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