STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7SYT3Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (534 aa)    
Predicted Functional Partners:
A0A4Y7TXV0
Methylmalonate-semialdehyde dehydrogenase.
   
0.950
A0A4Y7TFL4
Acetyl-coenzyme A synthetase.
   
 0.946
A0A4Y7TMH1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.937
A0A4Y7T6Y8
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.928
A0A4Y7TPZ5
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
    
 0.927
A0A4Y7TC76
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.920
A0A4Y7TCE6
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.918
A0A4Y7U106
Pyruvate decarboxylase.
   
 0.916
A0A4Y7U2F1
Oxidoreductase.
   
 
 0.914
A0A4Y7SPX8
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
0.912
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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