STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7T0Q6Ergot alkaloid A. (283 aa)    
Predicted Functional Partners:
A0A4Y7U349
Carrier domain-containing protein.
  
 0.709
A0A4Y7U086
Bud-site selection protein.
   
 
 0.678
A0A4Y7SZB7
Ferredoxin.
   
 0.667
A0A4Y7TCF8
Uncharacterized protein.
   
 0.667
A0A4Y7T812
Peroxisome targeting signal receptor.
    
 0.662
A0A4Y7TVR6
TPR-like protein.
    
 0.662
A0A4Y7TQB9
NADH-ubiquinone oxidoreductase 23 kDa subunit.
    
 0.640
A0A4Y7T913
Pex14_N domain-containing protein.
    
  0.611
A0A4Y7TM14
GRIP domain-containing protein.
    
  0.611
A0A4Y7TN44
Pex14_N domain-containing protein.
    
  0.611
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.