STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7T4E9Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
A0A4Y7R8S6
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 
 0.588
A0A4Y7T2A6
Kinase-like protein.
    
 
 0.588
A0A4Y7TKR9
Kinase-like protein.
    
 
 0.588
A0A4Y7TNH7
Kinase-like protein.
    
 
 0.588
A0A4Y7T6V8
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.543
A0A4Y7TRR7
DWNN-domain-containing protein.
    
   0.495
A0A4Y7TZV2
SMAD/FHA domain-containing protein.
    
   0.495
A0A4Y7SE10
RRM domain-containing protein.
   
 
 0.493
A0A4Y7T5M7
RNA-binding domain-containing protein.
   
 
 0.493
A0A4Y7TDG4
Uncharacterized protein.
   
 
 0.449
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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