STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7T5K5tRNA modification GTPase TrmE. (571 aa)    
Predicted Functional Partners:
A0A4Y7SSV7
Glucose-inhibited division protein A subfamily.
 0.969
A0A4Y7SN56
Endoplasmic reticulum-golgi intermediate compartment protein 2.
  
 0.895
A0A4Y7SWT4
Uncharacterized protein.
  
 0.895
A0A4Y7TWY2
Ribosomal protein L1.
   
 
 0.883
A0A4Y7TPD3
Ribosomal protein L15.
    
 
 0.806
A0A4Y7THR5
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.797
A0A4Y7TZ63
G domain-containing protein.
  
 
 0.794
A0A4Y7T9B3
60s ribosomal protein l7.
   
   0.770
A0A4Y7TDL9
50S ribosomal protein L13.
    
 
 0.770
A0A4Y7U1R0
50s ribosomal protein; Belongs to the universal ribosomal protein uL6 family.
    
   0.769
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.