STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7T6U9ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (907 aa)    
Predicted Functional Partners:
A0A4Y7TH26
PLP-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.700
A0A4Y7SRU9
NADPH:adrenodoxin oxidoreductase, mitochondrial.
   
 
  0.660
A0A4Y7TG43
P-loop containing nucleoside triphosphate hydrolase protein.
  
  
  0.635
A0A4Y7SKH9
P-loop containing nucleoside triphosphate hydrolase protein.
  
  
  0.634
A0A4Y7T4S0
Argininosuccinate synthetase.
    
 0.608
A0A4Y7TKN0
Uncharacterized protein.
    
   0.593
A0A4Y7TP05
NADPH-dependent glutamate synthase.
   
 
  0.587
A0A4Y7T9V6
Dihydrolipoyl dehydrogenase.
     
 0.579
A0A4Y7TQP4
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
   
 0.579
A0A4Y7TNU8
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.578
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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