STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TBL2Aromatic compound dioxygenase. (354 aa)    
Predicted Functional Partners:
A0A4Y7SXL0
Serine/threonine protein phosphatase PP2A-associated protein.
    
 0.691
A0A4Y7TL87
Metallo-dependent phosphatase.
    
 
 0.673
A0A4Y7TM11
Serine/threonine-protein phosphatase.
    
 
 0.673
A0A4Y7TRE6
ATP synthase F1, alpha subunit; Belongs to the ATPase alpha/beta chains family.
    
 
 0.668
A0A4Y7TF42
ATP synthase subunit gamma.
   
   0.655
A0A4Y7SU62
Serine/threonine-protein phosphatase.
   
 
 0.616
A0A4Y7TGE8
ATP4, subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.
    
   0.616
A0A4Y7SY29
Uncharacterized protein.
    
 0.606
A0A4Y7SYF5
Uncharacterized protein.
    
 0.606
A0A4Y7T545
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.606
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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