STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TEE0Pectin lyase-like protein. (431 aa)    
Predicted Functional Partners:
A0A4Y7TDW7
Uncharacterized protein.
   
   0.758
A0A4Y7T9D7
Multidrug resistance protein.
    
 0.747
A0A4Y7SUG0
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.739
A0A4Y7TGJ1
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.729
A0A4Y7TZ55
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.702
A0A4Y7TMH5
Cyclin-dependent protein kinase inhibitor.
    
 0.693
A0A4Y7T6B0
Ribosomal protein L2.
   
 
 0.679
A0A4Y7T268
Ribosomal protein L39e.
   
   0.668
A0A4Y7TEQ4
Ribosomal protein L2.
   
 
 0.655
A0A4Y7TBC8
Uncharacterized protein.
    
  0.640
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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