A0A4Y7TH05 protein (Coprinellus micaceus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Y7TH05

AAA domain-containing protein. (589 aa)

Predicted Functional Partners:

A0A4Y7SB08

0.533

A0A4Y7SDD4

0.530

A0A4Y7SVB1

0.528

A0A4Y7SUS3

0.527

A0A4Y7TT74

0.527

A0A4Y7TJT0

0.513

A0A4Y7STS2

0.502

Your Current Organism:

Coprinellus micaceus

NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y7SB08	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.533
A0A4Y7SDD4	A0A4Y7STS2	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A4Y7SDD4	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.530
A0A4Y7SDD4	A0A4Y7TJT0	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A4Y7STS2	A0A4Y7SDD4	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A4Y7STS2	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.502
A0A4Y7SUS3	A0A4Y7TH05	AAA_16 domain-containing protein.	AAA domain-containing protein.	0.527
A0A4Y7SVB1	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.528
A0A4Y7TH05	A0A4Y7SB08	AAA domain-containing protein.	Uncharacterized protein.	0.533
A0A4Y7TH05	A0A4Y7SDD4	AAA domain-containing protein.	Uncharacterized protein.	0.530
A0A4Y7TH05	A0A4Y7STS2	AAA domain-containing protein.	Uncharacterized protein.	0.502
A0A4Y7TH05	A0A4Y7SUS3	AAA domain-containing protein.	AAA_16 domain-containing protein.	0.527
A0A4Y7TH05	A0A4Y7SVB1	AAA domain-containing protein.	Uncharacterized protein.	0.528
A0A4Y7TH05	A0A4Y7TJT0	AAA domain-containing protein.	Uncharacterized protein.	0.513
A0A4Y7TH05	A0A4Y7TT74	AAA domain-containing protein.	Uncharacterized protein.	0.527
A0A4Y7TJT0	A0A4Y7SDD4	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A4Y7TJT0	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.513
A0A4Y7TT74	A0A4Y7TH05	Uncharacterized protein.	AAA domain-containing protein.	0.527