STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7THD7WD40 repeat-like protein. (1366 aa)    
Predicted Functional Partners:
A0A4Y7TEA3
PRP3-domain-containing protein.
   
 0.905
A0A4Y7TPM4
Nop domain-containing protein.
   
 0.887
A0A4Y7TVJ1
Small nuclear ribonucleoprotein Sm D3.
   
  0.880
A0A4Y7SVM8
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.873
A0A4Y7TZ54
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.867
A0A4Y7TMK7
Small nuclear ribonucleo protein SmF.
   
  0.864
A0A4Y7TYH3
Small nuclear ribonucleoprotein Sm D2.
   
 0.853
A0A4Y7SUI7
AAA domain-containing protein.
    
 0.836
A0A4Y7SWX1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.836
A0A4Y7TPJ9
Small nuclear ribonucleoprotein G.
   
 0.836
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.