STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TJ79DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (735 aa)    
Predicted Functional Partners:
A0A4Y7T9N1
RNA-binding domain-containing protein.
   
 
 0.988
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.985
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.985
A0A4Y7TNT2
Uncharacterized protein.
   
 
 0.984
A0A4Y7TJQ7
WD40 repeat-like protein.
 
 
 
 0.983
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.981
A0A4Y7T110
ARM repeat-containing protein.
   
 
 0.977
A0A4Y7TZW6
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
0.977
A0A4Y7TRC2
ATP-dependent RNA helicase dbp9.
  
 
0.976
A0A4Y7TSC3
Nop14-like protein.
   
 0.975
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.