STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TM00Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
A0A4Y7U066
Uncharacterized protein.
   
 0.967
A0A4Y7TVM0
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.935
A0A4Y7T7W7
WD40 repeat-like protein.
   
 0.925
A0A4Y7SVT9
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.903
A0A4Y7SQE8
Uncharacterized protein.
    
 0.895
A0A4Y7T5I4
Uncharacterized protein.
    
 0.861
A0A4Y7TGP4
WD40 repeat-like protein.
   
 0.803
A0A4Y7SDT2
Uncharacterized protein.
    
 0.792
A0A4Y7SLX3
Uncharacterized protein.
    
 0.792
A0A4Y7SML5
Uncharacterized protein.
    
 0.792
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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