STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TMI1Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (476 aa)    
Predicted Functional Partners:
A0A4Y7TMT2
Aconitase.
  
 
 0.972
A0A4Y7TZB7
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.938
A0A4Y7T9N0
Dihydroxy-acid dehydratase.
  
 
 0.909
A0A4Y7U069
Dihydroxy-acid dehydratase.
  
 
 0.909
A0A4Y7TTM3
Acetolactate synthase.
  
 
 0.908
A0A4Y7RYN0
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.893
A0A4Y7T5N5
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.893
A0A4Y7T7M5
Peroxisomal 3-ketoacyl-CoA-thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.892
A0A4Y7RTA4
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
 0.890
A0A4Y7TXH2
Uncharacterized protein.
  
 
 0.889
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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