STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TMJ0EF Tu GTP binding domain-containing protein. (461 aa)    
Predicted Functional Partners:
A0A4Y7TMI0
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 0.991
A0A4Y7TZ46
EXOSC1 domain-containing protein.
    
 0.991
A0A4Y7SM44
Ribosomal protein S5 domain 2-like protein.
   
 0.990
A0A4Y7TFM6
RNase_PH domain-containing protein.
    
 0.990
A0A4Y7SLI0
Exosome component 4.
    
 0.989
A0A4Y7SLM7
Uncharacterized protein.
    
 0.989
A0A4Y7T5G7
Uncharacterized protein.
    
 0.989
A0A4Y7SSV3
Ribosomal protein S5 domain 2-like protein.
    
 0.980
A0A4Y7TP58
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 0.980
A0A4Y7SPG4
Ribosomal protein S5 domain 2-like protein.
    
 0.978
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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