STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TNG2Uncharacterized protein. (510 aa)    
Predicted Functional Partners:
A0A4Y7SGB3
Histone H2A; Belongs to the histone H2A family.
   
 0.883
A0A4Y7THL1
Histone H2A; Belongs to the histone H2A family.
   
 0.883
A0A4Y7T855
BSD domain-containing protein.
    
 0.878
A0A4Y7TKJ5
DNA helicase.
   
 0.873
A0A4Y7T8A5
Rpa49 subunit specific to nuclear RNA polymerase I.
    
 0.871
A0A4Y7TWA2
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.864
A0A4Y7TCM1
Transcription factor TFIIH complex subunit Rad15.
    
 0.861
A0A4Y7TRZ2
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.860
A0A4Y7TPR1
Uncharacterized protein.
   
 0.859
A0A4Y7TNA9
Actin/actin-like protein; Belongs to the actin family.
   
 0.853
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.