STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TUM9Letm1 RBD domain-containing protein. (376 aa)    
Predicted Functional Partners:
A0A4Y7T8D5
Mitochondrial 50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.771
A0A4Y7TLL4
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.742
A0A4Y7TWD1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.710
A0A4Y7T6B0
Ribosomal protein L2.
    
 
 0.700
A0A4Y7SN71
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.694
A0A4Y7TQ39
Mitochondrial ribosomal protein subunit S2.
   
   0.691
A0A4Y7TVD1
Guanine nucleotide binding protein beta subunit.
    
 
 0.691
A0A4Y7TEQ4
Ribosomal protein L2.
    
 
 0.690
A0A4Y7TN85
60S ribosomal protein L9.
    
 
 0.686
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.685
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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