STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TVZ8C2H2-type domain-containing protein. (570 aa)    
Predicted Functional Partners:
A0A4Y7T577
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.770
A0A4Y7T4M9
Proteasome endopeptidase complex.
    
 
 0.763
A0A4Y7T4Q5
VWFA domain-containing protein.
    
 
 0.743
A0A4Y7TMH5
Cyclin-dependent protein kinase inhibitor.
   
 
 0.690
A0A4Y7R5K3
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.676
A0A4Y7T762
WD40 repeat-like protein.
    
 
 0.659
A0A4Y7T877
E3 ubiquitin protein ligase.
    
   0.649
A0A4Y7TVC7
Uncharacterized protein.
    
   0.645
A0A4Y7TQ07
26S proteasome subunit P45.
    
 
 0.601
A0A4Y7T8Q9
26S proteasome regulatory complex, ATPase RPT6; Belongs to the AAA ATPase family.
    
 
 0.583
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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