STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TWX3tRNA-dihydrouridine synthase 2. (462 aa)    
Predicted Functional Partners:
A0A4Y7TD32
Prolyl-tRNA synthetase.
  
 
 0.814
A0A4Y7TQG1
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.812
A0A4Y7TS29
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.776
A0A4Y7SXH7
Ribosome biogenesis protein BRX1.
   
    0.729
A0A4Y7TI85
Pseudouridine synthase.
  
 
 0.712
A0A4Y7TL35
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.654
A0A4Y7TDT4
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.635
A0A4Y7T1Y3
FMN-linked oxidoreductase.
  
  
0.631
A0A4Y7T210
Dus-domain-containing protein.
  
  
0.631
A0A4Y7TKP3
FMN-linked oxidoreductase.
  
  
0.630
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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