STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TZC6SGT1-domain-containing protein. (865 aa)    
Predicted Functional Partners:
A0A4Y7U0E7
Pre-mRNA-processing-splicing factor.
    
 
 0.915
A0A4Y7T6M6
Sec63-domain-containing protein.
    
 
 0.901
A0A4Y7TWY6
Calreticulin-domain-containing protein.
   
 
 0.813
A0A4Y7TYU2
Adaptor protein complex sigma subunit.
 
 
    0.757
A0A4Y7TRA0
Uncharacterized protein.
    
 
 0.741
A0A4Y7TNU0
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.736
A0A4Y7SXG2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.728
A0A4Y7TTM7
Uncharacterized protein.
    
 
 0.686
A0A4Y7SPR7
Uncharacterized protein.
    
   0.669
A0A4Y7SQ21
U5 snRNP complex subunit.
    
   0.669
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.