STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7U0F9Isocitrate lyase. (540 aa)    
Predicted Functional Partners:
A0A4Y7T2S2
Malate synthase; Belongs to the malate synthase family.
 
 
 0.997
A0A4Y7SAJ1
Malate synthase G.
 
 
 0.983
A0A4Y7T556
Alanine-glyoxylate transaminase.
  
 
 0.967
A0A4Y7STB0
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.965
A0A4Y7T829
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.934
A0A4Y7TWT3
Isocitrate lyase.
  
  
 
0.909
A0A4Y7TKK3
Aldolase; Belongs to the DapA family.
   
 
  0.897
A0A4Y7TZB7
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.887
A0A4Y7STY1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.879
A0A4Y7SZE3
Citrate synthase; Belongs to the citrate synthase family.
  
 0.879
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.