STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7U1L3Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (513 aa)    
Predicted Functional Partners:
A0A4Y7TMX5
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.996
A0A4Y7TW12
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.995
A0A4Y7TRN0
Coproporphyrinogen III oxidase.
  
 
 0.960
A0A4Y7SI63
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
 
 0.776
A0A4Y7TYX2
UDP-glucose 4-epimerase.
    
  0.745
A0A4Y7TY36
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.638
A0A4Y7TC76
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.634
A0A4Y7TKP5
Onanonoxo-7-onima-8-eninoihtemlysoneda.
    
 0.634
A0A4Y7TMH0
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.634
A0A4Y7SEA8
Ornithine aminotransferase.
    
 0.627
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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