STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7U1R2Cyclin-like protein; Belongs to the cyclin family. (375 aa)    
Predicted Functional Partners:
A0A4Y7TND5
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.991
A0A4Y7TVZ3
CID domain-containing protein.
   
 
 0.976
A0A4Y7T729
Pkinase-domain-containing protein.
    
 0.967
A0A4Y7TN81
Uncharacterized protein.
    
 0.955
A0A4Y7TIQ0
Uncharacterized protein.
    
 0.887
A0A4Y7T679
Uncharacterized protein.
   
 0.857
A0A4Y7T324
Uncharacterized protein.
    
 0.850
A0A4Y7TEW2
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.850
A0A4Y7TQR9
Cyclin-like protein; Belongs to the cyclin family.
    
0.840
A0A4Y7TIN2
RNA-binding domain-containing protein.
    
 0.838
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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