STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI15311.1Transcriptional regulator, XRE family. (310 aa)    
Predicted Functional Partners:
AEI15312.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
    0.828
coaX
Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.813
AEI15314.1
biotin/acetyl-CoA-carboxylase ligase.
       0.813
AEI15315.1
Response regulator receiver protein.
       0.812
AEI14552.1
Cell shape determining protein, MreB/Mrl family.
  
 
 0.709
AEI15310.1
Hypothetical protein.
       0.634
AEI14339.1
Hypothetical protein.
   
 
 0.632
AEI15309.1
Cysteine desulfurase.
  
    0.629
AEI15307.1
Nitrogen-fixing NifU domain-containing protein.
       0.604
AEI15308.1
FeS cluster assembly scaffold protein NifU.
       0.604
Your Current Organism:
Flexistipes sinusarabici
NCBI taxonomy Id: 717231
Other names: F. sinusarabici DSM 4947, Flexistipes sinusarabici DSM 4947, Flexistipes sinusarabici str. DSM 4947, Flexistipes sinusarabici strain DSM 4947
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.