Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEI15629.1Two component, sigma54 specific, transcriptional regulator, Fis family. (438 aa)    
Predicted Functional Partners:
AEI15630.1
Integral membrane sensor signal transduction histidine kinase.
 
 
   0.857
AEI15631.1
NHL repeat containing protein.
       0.778
AEI14643.1
RNA polymerase, sigma 54 subunit, RpoN.
 
   
 0.773
AEI15632.1
Cytochrome C family protein.
       0.766
AEI15633.1
Hypothetical protein.
       0.762
AEI15634.1
Cytochrome C family protein.
       0.609
AEI14765.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.539
Flexsi_0575
Integral membrane sensor signal transduction histidine kinase.
  
 
   0.537
AEI14874.1
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.523
AEI14304.1
Integral membrane sensor signal transduction histidine kinase.
  
 
   0.468
Your Current Organism:
Flexistipes sinusarabici
NCBI taxonomy Id: 717231
Other names: F. sinusarabici DSM 4947, Flexistipes sinusarabici DSM 4947, Flexistipes sinusarabici str. DSM 4947, Flexistipes sinusarabici strain DSM 4947
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