Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI15631.1NHL repeat containing protein. (364 aa)    
Predicted Functional Partners:
AEI15632.1
Cytochrome C family protein.
 
     0.908
AEI15629.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
       0.778
AEI15630.1
Integral membrane sensor signal transduction histidine kinase.
       0.778
AEI15634.1
Cytochrome C family protein.
 
     0.778
AEI15636.1
NHL repeat containing protein.
  
     0.773
AEI15633.1
Hypothetical protein.
       0.762
AEI15620.1
Cytochrome C family protein.
  
     0.649
AEI15628.1
Multiheme C-type cytochrome.
  
     0.637
AEI14822.1
Cytochrome c family protein.
  
 
 0.481
AEI14831.1
Cytochrome c family protein.
  
 
 0.481
Your Current Organism:
Flexistipes sinusarabici
NCBI taxonomy Id: 717231
Other names: F. sinusarabici DSM 4947, Flexistipes sinusarabici DSM 4947, Flexistipes sinusarabici str. DSM 4947, Flexistipes sinusarabici strain DSM 4947
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