STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0WYZ6_CULQUNegative elongation factor B. (590 aa)    
Predicted Functional Partners:
B0W910_CULQU
HDAg domain-containing protein.
   
 0.995
B0VZ65_CULQU
Negative elongation factor E.
    
 0.993
B0W6Z7_CULQU
Transcription elongation factor SPT5.
   
 0.978
B0X7A5_CULQU
DNA-directed RNA polymerase II 23 kDa polypeptide.
    
 0.956
B0W4J8_CULQU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.953
B0WYR4_CULQU
Uncharacterized protein.
   
 0.946
B0X365_CULQU
Uncharacterized protein.
   
 0.946
B0X367_CULQU
Th1l protein.
   
 0.946
B0WT61_CULQU
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.939
B0WFP1_CULQU
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.922
Your Current Organism:
Culex quinquefasciatus
NCBI taxonomy Id: 7176
Other names: C. quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus, southern house mosquito
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.