STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA56698.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
AGA58626.1
PFAM: Domain of unkown function (DUF1901).
  
     0.624
AGA57834.1
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
     0.596
AGA57835.1
PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.
 
     0.596
AGA58725.1
Hypothetical protein.
  
     0.535
AGA58723.1
PFAM: Tubulin-tyrosine ligase family.
  
     0.525
AGA56697.1
Response regulator of the LytR/AlgR family; PFAM: LytTr DNA-binding domain.
       0.494
AGA58118.1
PFAM: Conserved membrane protein YqhR.
  
     0.452
AGA58028.1
PFAM: Protein of unknown function (DUF2953).
  
     0.450
AGA57377.1
Hypothetical protein; PFAM: Hemerythrin HHE cation binding domain.
 
     0.441
AGA58740.1
Molybdopterin converting factor, large subunit; PFAM: ThiS family; MoaE protein.
       0.431
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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