STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA56809.1ATPase involved in chromosome partitioning. (393 aa)    
Predicted Functional Partners:
AGA56812.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
       0.834
AGA56811.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
       0.797
AGA56810.1
Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein.
       0.783
AGA59911.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.746
AGA56813.1
Hypothetical protein.
       0.667
AGA56815.1
Hypothetical protein.
       0.655
AGA56814.1
Hypothetical protein.
       0.646
AGA56816.1
PFAM: TadE-like protein.
       0.644
AGA59249.1
Capsular polysaccharide biosynthesis protein; PFAM: Chain length determinant protein.
  
 
 0.595
AGA59230.1
Hypothetical protein.
  
 
 0.573
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.