STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA57710.1PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355). (965 aa)    
Predicted Functional Partners:
AGA57709.1
PFAM: Aerotolerance regulator N-terminal.
    0.973
AGA57708.1
PFAM: Protein of unknown function DUF58.
 
     0.926
AGA57706.1
Hypothetical protein.
 
     0.913
AGA57703.1
Hypothetical protein.
 
     0.879
AGA57705.1
Hypothetical protein.
 
     0.878
AGA57704.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
     0.874
AGA57707.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.795
AGA57711.1
PFAM: Domain of unknown function (DUF1992).
       0.517
AGA57712.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
       0.517
AGA59707.1
PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.
  
  
 0.500
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.