STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA57820.1Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain. (464 aa)    
Predicted Functional Partners:
AGA57821.1
PFAM: Demethylmenaquinone methyltransferase.
  
 0.894
AGA56890.1
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain.
  
     0.726
AGA57819.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
     
 0.661
AGA57647.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
     0.658
AGA59269.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
 
   
 0.593
AGA56650.1
PFAM: Fumarylacetoacetate (FAA) hydrolase family.
 
   
 0.552
AGA59605.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
 
  
 0.482
AGA57467.1
PFAM: Inosine-uridine preferring nucleoside hydrolase.
  
     0.480
AGA59803.1
Dihydroorotase-like cyclic amidohydrolase; PFAM: D-aminoacylase, C-terminal region.
 
     0.441
AGA59298.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
 
   
 0.424
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.