STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA58243.1PFAM: Flagellar hook-length control protein FliK. (648 aa)    
Predicted Functional Partners:
AGA57296.1
Superfamily II DNA helicase; PFAM: HRDC domain.
 
 
 0.807
AGA58241.1
PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; Belongs to the UPF0102 family.
       0.799
AGA58242.1
Uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.
       0.799
AGA58222.1
Hypothetical protein.
  
     0.773
AGA58466.1
Hypothetical protein.
  
     0.772
AGA59804.1
PFAM: Predicted membrane protein (DUF2232).
  
     0.770
AGA58006.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.761
AGA56387.1
PFAM: YycH protein.
  
     0.756
AGA58212.1
PFAM: Flagellar biosynthesis protein, FliO.
  
     0.752
AGA58216.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.752
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.