STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA58319.1PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family. (159 aa)    
Predicted Functional Partners:
AGA58138.1
Putative membrane protein; PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
 
 
 0.967
AGA58318.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2129).
 
    0.879
AGA58328.1
PFAM: Protein of unknown function (DUF1507); Belongs to the UPF0358 family.
 
     0.797
AGA58320.1
Hypothetical protein.
       0.742
AGA58321.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
       0.742
AGA58425.1
Cell division septal protein; Essential cell division protein.
  
     0.728
AGA59757.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
     0.712
AGA59758.1
Putative PSP1-like protein; PFAM: PSP1 C-terminal conserved region.
 
   
 0.702
AGA59118.1
PFAM: Protein of unknown function (DUF1027).
  
     0.686
AGA58325.1
PFAM: YugN-like family.
 
     0.667
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.