STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA59015.1PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (584 aa)    
Predicted Functional Partners:
AGA59014.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
  0.972
AGA56847.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
  0.881
AGA56626.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
  0.875
AGA58868.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.862
AGA57680.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.860
AGA57176.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.858
AGA56656.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.857
AGA59408.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.851
AGA56674.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
 
  0.848
AGA57524.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
  0.848
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.